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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789489.1_cds_XP_016496606.1_1016
CDS Infomation

[gene=LOC107815498] [db_xref=GeneID:107815498] [protein=low-temperature-induced cysteine proteinase-like isoform X2] [protein_id=XP_016496606.1] [location=complement(join(27637..27780,28902..29399,29509..29646,29740..29975,30160..30448))] [gbkey=CDS]
Sequence

ATGAGGTTGGAAAAGTTTAGAAGGAATGTGAAGTATATAGTGGAAAAGAACTCAAAGAGG
AAGTCAGATTCAGACCATTTGGTTGGTTTGACCAACTTTGCTGATATGAGTAATGAAGAG
TTCAGGCAAGTTCATACTTCAAAGATAAAGATACCATTTGACAAGAGAAAGACTATTCAG
ATGAAGAATGTGGAAAAAAAACCAACTCCAGTTTATTGTGATGCTCCTCCTTCAAGGGAT
TGGAGGAAACATGGGGCTGTCACTGAGGTCAAGAATCAAGACCTATGTGGAGCTTGCTGG
GCATTTTCAGCTTGTGGAGCCATGGAGGGAATAAATGCAATAGTTACTGGTGAAATTATT
AGCCTTTCTGTCCAACAACTTATCAATTGTGATAATTCAACCAATTTGGGCTGTTACGGT
GGATATATGGACCCTGCTTTTGAATGGGTGATGAATAATAGTGGCATTGATTCAGATTCT
GATTATCCATACACTGTCTCTCAAGGCGCATGCAATATCACCAAGGTGAACCAAAAGGTT
GTAACAATTGATGGATACCGAGATGTTCCACAGGAGGAAAGTGCCCTTCTTTGTGCTGTT
GCTCAACAGCCTGTTAGTGCGGGCATTGATGGATCGAGTGCTGATTTTCAATTGTATAGA
GGGGGAATCTATGATGGACGTTGCTCTAGTAATCCAGATGACTTAAGCCATGGACTACTA
ATAGTAGGATATGGTTCTGAAGGAGATGATGACTATTGGATAATGAAGAACTCATGGGGT
ACATCATGGGGAATGGAGGGGTATGGATATATAAGAAGGAACACTGATTTGCCATATGGG
GTTTGTGCCATTAATTCATTGGCTTCATATCCAACGAAGGAACTGGCTTCTGCACCATCT
CCTTATCCGTCTCCAGCTGTTCCGCCACCTCCCTCGCCATCCCCTCCACCCCCTCCACCA
CCTTCTCCAAAACCAAGTGAATGTGGAAACTTGTATTATTGTCCAGAAGATCAAACATGC
TGCTGTGAGTTGTACTTTTTTGGCATGTGCTTCATTCAAACTTGCTGTCCTCATAAAAAT
GGTGTTTGCTGTGATGGATCAGAATACTGCTGCCCAACTGAATATCCCATTTGTGATGTT
TATGAAGGCCTCTGCCTCAAGAGGGTTCAAGACACTCTGGGAGTGGCAGCAAAGAAAAGA
AGAATGGCCAAATACAAGTTACCATGGAGTACAAGCACTAAAGAAACAGAGGATATGGAC
CAAACTCTGAAATGGAAGAGGAATCATGTTGCCCCAATACTCTGA

Peptide Sequence

PEP ID

XP_016496606.1
PEP Infomation

PREDICTED: low-temperature-induced cysteine proteinase-like isoform X2 [Nicotiana tabacum]
Sequence

MRLEKFRRNVKYIVEKNSKRKSDSDHLVGLTNFADMSNEEFRQVHTSKIKIPFDKRKTIQ
MKNVEKKPTPVYCDAPPSRDWRKHGAVTEVKNQDLCGACWAFSACGAMEGINAIVTGEII
SLSVQQLINCDNSTNLGCYGGYMDPAFEWVMNNSGIDSDSDYPYTVSQGACNITKVNQKV
VTIDGYRDVPQEESALLCAVAQQPVSAGIDGSSADFQLYRGGIYDGRCSSNPDDLSHGLL
IVGYGSEGDDDYWIMKNSWGTSWGMEGYGYIRRNTDLPYGVCAINSLASYPTKELASAPS
PYPSPAVPPPPSPSPPPPPPPSPKPSECGNLYYCPEDQTCCCELYFFGMCFIQTCCPHKN
GVCCDGSEYCCPTEYPICDVYEGLCLKRVQDTLGVAAKKRRMAKYKLPWSTSTKETEDMD
QTLKWKRNHVAPIL

Transcript Sequence

Gene sequence data has not been registered.